[102] Anagha M.G., P. Kubisiak, P. Chytrosz-Wrobel, M. Golda-Cepa, L. Cwiklik, W. Kulig, A. Kotarba,
Unraveling the effect of water and ethanol on ibuprofen nanoparticles formation
submitted
[101] M. Kukulka, B. Pem, K. Vazdar, L. Cwiklik, M. Vazdar, UV Absorption Spectra of TAMRA Fluorescent Probe And TAMRA Labeled Peptides:
A Combined Density Functional Theory and Classical Molecular Dynamics Study
submitted
[100] H. Brzobohata, M. Dugic, V. Mojr, N. Sahatsapan, I. Kosiova, T. Krizek, T. Dolejsova, P. Liskova, L. Cwiklik, D. Rejman, R. Fiser, G. Mikusova,
LEGO-Lipophosphonoxin membrane activity is enhanced by presence of phosphatidylethanolamine but hindered by outer membrane
Scientific Reports 2024, accepted
[99] T. Dolejsova, P. Liskova, N. Sahatsapan, V. Mojr, R. Pohl, H. Brzobohata, M. Dugic, T. Krizek, L. Cwiklik, G. Mikusova, D. Rejman, R. Fiser,
Naphthylated LEGO-LPPO antibiotics used as a fluorescent tool for observation of target membrane perturbations preceding its disruption
Methods and Applications in Fluorescence 2024, 13, 015001. DOI: 10.1088/2050-6120/ad8abf
[98] H. Korolainen, A. Olzynska, W.Pajerski, I. Vattulainen, W. Kulig, L. Cwiklik,
Assessing vitamin E acetate as a proxy for E-cigarette additives in a realistic pulmonary surfactant model
Scientific Reports 2024, 14, 23805. DOI: 10.1038/s41598-024-75301-8
[97] F. Scollo, C. Tempra, H. Evci, M. Riopedre Fernandez, A. Olzynska, M. Javanainen, A. Uday, M. Cebecauer, L. Cwiklik, H. Martinez-Seara,
P. Jungwirth, P.Jurkiewicz, Martin Hof, Can calmodulin bind to lipids of the cytosolic leaflet of plasma membranes?
Open Biology 2024, 14, 240067. DOI: 10.1098/rsob.240067
[96] G.C.N. Thakur, A. Uday, M. Cebecauer, W.H. Roos, L. Cwiklik, M. Hof, P. Jurkiewicz, A. Melcrova, Charge of a Transmembrane Peptide Alters Its Interactions with Lipid Membranes
Colloids and Surfaces B: Biointerfaces 2024, 235, 113765. DOI: 10.1016/j.colsurfb.2024.113765
[95] M.C. Saija, K. Vazdar, W. Pajerski, A. Olzynska, P. Daull, J.-S. Garrigue, L. Cwiklik, A comparative study of latanoprost drug delivery systems for glaucoma treatment and their interaction with the tear film lipid layer models
ACS Molecular Pharmaceutics 2024, 21, 126-136. DOI: 10.1021/acs.molpharmaceut.3c00635
2023
[94] P. Chytrosz-Wrobel, M. Golda-Cepa, K. Drozdz, J. Rysz, P. Kubisiak, W. Kulig, M. Brzychczy-Wloch, L. Cwiklik, A. Kotarba, In vitro and in silico studies of functionalised polyurethane surfaces towards understanding biologically relevant interactions
ACS Biomaterials Science & Engineering 2023, 9, 6112-6122. DOI: 10.1021/acsbiomaterials.3c01367
[93] M.C. Saija, A. Melcrova, W. Pajerski, I. Schachter, M. Javanainen, M. Cebecauer, L. Cwiklik, Palmitoylation modifies transmembrane adaptor protein PAG for ordered lipid environment: a molecular dynamics simulation study
Biophysical Chemistry 2023, 304, 107124. DOI: 10.1016/j.bpc.2023.107124
[92] K. Riedlova, M.C. Saija, A. Olzynska, K. Vazdar, P. Daull, J.-S. Garrigue, L. Cwiklik, Latanoprost incorporates in the Tear Film Lipid Layer: an experimental and computational model study
International Journal of Pharmaceutics 2023, 645, 123367. DOI: 10.1016/j.ijpharm.2023.123367
[91] D. Davidovic, M. Kukulka, M.J. Sarmento, I. Mikhaylov, N. Gretskaya, B. Chmelova, J.C. Ricardo, M. Hof, L. Cwiklik, R. Sachl, Which moiety drives gangliosides to form nanodomains?
Journal of Physical Chemistry Letters 2023, 14, 5791-5797. DOI: 10.1021/acs.jpclett.3c00761
[90] K. Vazdar, C. Tempra, A. Olzynska, D. Biriukov, L. Cwiklik, M. Vazdar, A Stealthy Player in Lipid Experiments? EDTA Binding to Phosphatidylcholine Membranes Probed by Simulations and Monolayer Experiments
Journal of Physical Chemistry B 2023, 127, 5462-5469. DOI: 10.1021/acs.jpcb.3c03207
[89] K. Riedlova, M. C. Saija, A. Olzynska, P. Jurkiewicz, P. Daull, J.-S. Garrigue, L. Cwiklik, Influence of BAKs on Tear Film Lipid Layer: in vitro and in silico models
European Journal of Pharmaceutics and Biopharmaceutics 2023, 186, 65-73. DOI: 10.1016/j.ejpb.2023.03.007
[88] J. Liekkinen, A. Olzynska, L. Cwiklik, J. Bernardino de la Serna, I. Vattulainen, M. Javanainen, Surfactant Proteins SP-B and SP-C in Pulmonary Surfactant Monolayers: Physical Properties Controlled by Specific Protein–Lipid Interactions
Langmuir 2023, 39, 4338-4350. DOI: 10.1021/acs.langmuir.2c03349
[87] P. Chytrosz-Wrobel, M. Golda-Cepa, P. Kubisiak, W. Kulig, L. Cwiklik, A. Kotarba, Sonochemical formation of fluorouracil nanoparticles: Toward Controlled Drug Delivery from Polymeric Surfaces
ACS Applied Nanomaterials 2023, 6, 4271-4278. DOI: 10.1021/acsanm.2c05332
2022
[86] M. Schicht, K. Riedlova, M. Kukulka, W. Li, A. Scheer, F. Garreis, C. Jacobi, F. Paulsen, L. Cwiklik, L. Brauer, The potential role of SP-G as surface tension regulator in tear film:
from molecular simulations to experimental observations
International Journal of Molecular Sciences 2022, 23, 5783. DOI: 10.3390/ijms23105783
[85] K. Riedlova, T. Dolejsova, R. Fiser, L. Cwiklik, H1 Helix of Colicin U Causes Phospholipid Membrane Permeation
BBA Biomembranes 2022, 1864, 183866. DOI: 10.1016/j.bbamem.2022.183866
2021
[84] P. Pospisil, L. Cwiklik, J. Sykora, M. Hof, G.M. Greetham, M. Towrie, A. Vlcek, Solvent-dependent excited-state evolution of Prodan dyes
Journal of Physical Chemistry B 2021, 125, 13858-13867. DOI: 10.1021/acs.jpcb.1c09030
[83] M. W. Baig, M. Pederzoli, M. Kyvala, L. Cwiklik, J. Pittner,
Theoretical investigation of the effect of alkylation and bromination
on intersystem crossing BODIPY-based photosensitizers
Journal of Physical Chemistry B 2021, 125, 11617-11627. DOI: 10.1021/acs.jpcb.1c05236
[82] D. Glatzova, H. Mavila, M. C. Saija, T. Chum, L. Cwiklik, T. Brdicka, M. Cebecauer, The role of prolines and glycine in the transmembrane domain of LAT
FEBS Journal 2021, 288, 4039-4052. DOI: 10.1111/febs.15713
2020
[81] P. Eftimov, A. Olzynska, A. Melcrova, G.A. Georgiev, P. Daull, J.-S. Garrigue, L. Cwiklik, Improving Stability of Tear Film Lipid Layer
via Concerted Action of Two Drug Molecules: a Biophysical View
International Journal of Molecular Sciences 2020, 21, 9490. DOI: 10.3390/ijms21249490
[80] M. Javanainen, W. Hua, O. Tichacek, P. Delcroix, L. Cwiklik, H. C. Allen, Structural Effects of Cation Binding to DPPC Monolayers
Langmuir 2020, 36, 15258-15269. DOI: 10.1021/acs.langmuir.0c02555
[79] A. Olzynska, W. Kulig, H. Mikkolainen, T. Czerniak, P. Jurkiewicz, L. Cwiklik, T. Rog,
M. Hof, P. Jungwirth, I. Vattulainen,
Tail-Oxidized Cholesterol Boosts Membrane Permeability to Small Polar Solutes
Langmuir 2020, 36, 10438-10447. DOI: 10.1021/acs.langmuir.0c01590
[78] R.O. Paananen, T. Viitaja, A. Olzynska, F.S. Ekholm, J. Moilanen, L. Cwiklik,
Interactions of polar lipids with cholesteryl ester multilayers elucidate tear film
lipid layer structure
Ocular Surface 2020, 18, 545-553. DOI: 10.1016/j.jtos.2020.06.001
[77] P. Daull, M. Amrane, D. Ismail, G. Georgiev, L. Cwiklik, C. Baudouin,
A. Leonardi, J.-S. Garrigue,
Cationic emulsion-based artificial tears as a mimic of functional healthy
tear film for restoration of ocular surface homeostasis in dry eye disease
Joural of Ocular Pharmacology and Therapeutics 2020, 36, 355-365. DOI: 10.1089/jop.2020.0011
[76] A.Olzynska, P. Wizert, M. Stefl, D. R. Iskander, L. Cwiklik,
Mixed polar-nonpolar lipid films as minimalistic models of Tear Film Lipid Layer:
a Langmuir trough and fluorescence microscopy study
BBA Biomembranes 2020, 1862, 183300. DOI: 10.1016/j.bbamem.2020.183300
[75] M. Golda-Cepa, K. Riedlova, W. Kulig, L. Cwiklik, A. Kotarba,
Functionalization of parylene C surface enhances nucleation of calcium phosphate:
combined experimental and molecular dynamics approach
ACS Applied Materials & Interfaces2020, 12, 12426-12435. DOI: 10.1021/acsami.9b20877
[74] A.Olzynska, P. Delcroix, T. Dolejsova, K. Krzaczek, B. Korchowiec, A. Czogalla, L. Cwiklik,
Properties of Realistic Lipid Models of Lung
Surfactant Containing Cholesterol and Oxidized
Lipids: a Mixed Experimental and Computational Study
Langmuir 2020, 36, 1023-1033. DOI: 10.1021/acs.langmuir.9b02469
2019
[73] A. Melcrova, S. Pokorna, M. Vosahlikova, J. Sykora, P. Svoboda, M. Hof, L. Cwiklik, P. Jurkiewicz,
Concurrent compression of phospholipid membranes by calcium and cholesterol
Langmuir 2019, 35, 11358-11368. DOI: 10.1021/acs.langmuir.9b00477
[72] M. Pederzoli, M. W. Baig, M. Kyvala, J. Pittner, L. Cwiklik,
Photophysics of BODIPY-Based Photosensitizer for Photodynamic Therapy:
Surface Hopping and Classical Molecular Dynamics
Journal of Chemical Theory and Computation 2019, 15, 5046-5057. DOI: 10.1021/acs.jctc.9b00533
2018
[71] M. Cebecauer, M. Amaro, P. Jurkiewicz, M.J. Sarmento, R. Sachl, L. Cwiklik, M. Hof, Membrane lipid nanodomains
Chemical Reviews 2018, 118, 11259-11297. DOI: 10.1021/acs.chemrev.8b00322
[70] M. Olsinova, P. Jurkiewicz, J. Sykora, J. Sabo, M. Hof, L. Cwiklik, M. Cebecauer, Roughness of Transmembrane Helices Reduces Lipid Membrane Dynamics
iScience 2018, 10, 87.97. DOI: 10.1016/j.isci.2018.11.026
[69] A. Stachowicz-Kusnierz, L. Cwiklik, J. Korchowiec, E. Rogalska, B. Korchowiec, The impact of lipid oxidation on functioning of a lung surfactant model
Physical Chemistry Chemical Physics 2018, 20, 24968-24978. DOI: 10.1039/C8CP04496A
[68] M. W. Baig, M. Pederzoli, P. Jurkiewicz, L. Cwiklik, J. Pittner, Orientation of Laurdan in phospholipid bilayers influences its fluorescence: Quantum Mechanics and Classical Molecular Dynamics Study
Molecules 2018, 23, 1717. DOI: 10.3390/molecules23071707
[67] W. Kulig, H. Mikkolainen, A. Olzynska, P. Jurkiewicz, L. Cwiklik, M. Hof, I. Vattulainen, P. Jungwirth, T. Rog, Bobbing of Oxysterols: Molecular Mechanism for Translocation of Tail-Oxidized Sterols Through Biological Membranes
Journal of Physical Chemistry Letters 2018, 9, 1118-1123. DOI: 10.1021/acs.jpclett.8b00211
[66] M. Javanainen, A. Lamberg, L. Cwiklik, I. Vattulainen, S. Ollila, Atomistic Model for Near-Quantitative Simulations of Langmuir Monolayers
Langmuir 2018, 34, 2565-2572. DOI: 10.1021/acs.langmuir.7b02855
2017
[65] A. Wizert, D.R. Iskander, L. Cwiklik, Interaction of lysozyme with a tear film lipid layer model: a molecular dynamics simulation study
BBA Biomembranes 2017, 1859, 2289-2296. DOI: 10.1016/j.bbamem.2017.08.015 PDF preprint
[64] M. Golda-Cepa, W. Kulig, L. Cwiklik, A. Kotarba, Molecular dynamics insights into water-parylene C interface - relevance of oxygen plasma treatment for biocompatibility
ACS Applied Materials & Interfaces 2017, 9, 16685-16693. DOI: 10.1021/acsami.7b03265
[63] A. Stachowicz-Kusnierz, S. Trojan, L. Cwiklik, B. Korchowiec, J. Korchowiec, Modeling Lung Surfactant Interactions with Benzo[a]pyrene
Chemistry - A European Journal 2017, 23, 5307-5316. DOI: 10.1002/chem.201605945
[62] G. Licari, L. Cwiklik, P. Jungwirth, E. Vauthey, Exploring Fluorescent Dyes at Biomimetic Interfaces with Second Harmonic Generation and Molecular Dynamics
Langmuir 2017, 33, 3373-3383. DOI: 10.1021/acs.langmuir.7b00403 PDF preprint
[61] E. Bilkova, R. Pleskot, S. Rissanen, S. Sun, A. Czogalla, L. Cwiklik, T. Rog, I. Vattulainen, P.S. Cremer, P. Jungwirth, U. Coskun, Calcium directly regulates phosphatidylinositol 4,5-bisphosphate head group conformation and recognition
Journal of the American Chemical Society 2017, 139, 4019-4024. DOI: 10.1021/jacs.6b11760 PDF preprint
[60] K. Riedlova, M. Nekardova, P. Kacer, K. Syslova, M. Vazdar, P. Jungwirth, E. Kudova, L. Cwiklik, Distributions of Therapeutically Promising Steroids in Cellular Membranes
Chemistry and Physics of Lipids 2017, 203, 78-86. DOI: 10.1016/j.chemphyslip.2016.12.004 PDF preprint
[59] A. Olzynska, L. Cwiklik, Bahavior of sphingomyelin and ceramide in a tear film lipid layer model (invited paper) Annals of Anatomy 2017, 210, 129-134. DOI: 10.1016/j.aanat.2016.10.005 PDF preprint
2016
[58] A. Melcrova, S. Pokorna, S. Pullanchery, M. Kohagen, P. Jurkiewicz, M. Hof, P. Jungwirth, P. S. Cremer, L. Cwiklik, The complex nature of calcium cation interactions with phospholipid bilayers
Scientific Reports 2016, 6, 38035. DOI: 10.1038/srep38035
[57] A. Olzynska, M. Zubek, M. Roeselova, J. Korchowiec, L. Cwiklik, Mixed DPPC/POPC Monolayers: All-atom Molecular Dynamics Simulations and Langmuir Monolayer Experiments
BBA Biomembranes 2016, 12, 3120-3130. DOI: 10.1016/j.bbamem.2016.09.015
[56] B. Bloch, R. Pleskot, P. Pejchar, M. Potocky, P. Trpkosova, L. Cwiklik, N. Vukasinovic, H. Sternberg, S. Yalovsky, V. Zarsky, Exocyst SEC3 and phosphoinositides define sites of exocytosis in pollen tube initiation and growth
Plant Physiology 2016, 172, 980-1002.
[55] R. Perkins, A. Kukharchuk, P. Delcroix, R. Shoemaker, M. Roeselova, L. Cwiklik, V. Vaida, The Partitioning of Small Aromatic Molecules to Air-Water and Phospholipid Interfaces Mediated by Non-Hydrophobic Interactions
Journal of Physical Chemistry B 2016, 120, 7408-7422. DOI: 10.1021/acs.jpcb.6b05084
[54] W. Kulig, L. Cwiklik, P. Jurkiewicz, T. Rog, I. Vattulainen, Cholesterol oxidation products and their biological importance (review paper) Chemistry and Physics of Lipids 2016, 199, 144-160. DOI: 10.1016/j.chemphyslip.2016.03.001
[53] L. Cwiklik, Tear film lipid layer: a molecular level view (review paper) BBA Biomembranes 2016, 10, 2421-2430. DOI: 10.1016/j.bbamem.2016.02.020
2015
[52] A. Habartova, M. Roeselova, L. Cwiklik, Investigation of mixed surfactant films at water surface using molecular dynamics simulations
Langmuir 2015, 31, 11508-11515. DOI: 10.1021/acs.langmuir.5b02854
[51] A. Nikouee, M. Khabiri, L. Cwiklik, Scorpion toxins prefer salt solutions
Journal of Molecular Modeling 2015, 21, 287. DOI: 10.1007/s00894-015-2822-y
[50] W. Kulig, A. Olzynska, P. Jurkiewicz, A. Kantola, S. Komulainen, M. Manna, M. Pourmousa, M. Vazdar, L. Cwiklik, T. Róg, G. Khelashvili, D. Harries, Daniel; V.-V. Telkki, M. Hof, I. Vattulainen, P. Jungwirth, Cholesterol under oxidative stress – how lipid membranes sense oxidation as cholesterol is being replaced by oxysterols
Free Radical Biology & Medicine 2015, 84, 30-41. DOI: 10.1016/j.freeradbiomed.2015.03.006
[49] E. Griffith, R. Perkins, D.-M. Telesford, E. Adams, L. Cwiklik, H. Allen, M. Roeselova, V. Vaida, Interaction of L-phenylalanine with a Phospholipid Monolayer at the Water-Air Interface
Journal of Physical Chemistry B 2015, 119, 9038–9048. DOI: 10.1021/jp508473w
[48] R. Pleskot, L. Cwiklik, P. Jungwirth, V. Zarsky, M. Potocky, Membrane targeting of the yeast exocyst complex
BBA Biomembranes 2015, 1848, 1481-1489. DOI: 10.1016/j.bbamem.2015.03.026
2014
[47] S. Pokorna, P. Jurkiewicz, M. Vazdar, L. Cwiklik, P. Jungwirth, M. Hof, Does fluoride disrupt hydrogen bond network in cationic lipid bilayer? Time-dependent fluorescence shift of Laurdan and MD simulations
Journal of Chemical Physics 2014, 141, 22D516. DOI: 10.1063/1.4898798
[46] F. Stetter, L. Cwiklik, P. Jungwirth, T. Hugel, Single Lipid Extraction – The Anchoring Strength of Cholesterol in Liquid Ordered and Liquid Disordered Phases
Biophysical Journal 2014, 107, 1167-1175. DOI: 10.1016/j.bpj.2014.07.018
[45] G. Forst, L. Cwiklik, P. Jurkiewicz, R. Schubert, M. Hof, Interactions of beta-blockers with model lipid membranes: Molecular view of the interaction of acebutolol, oxprenolol, and propranolol with phosphatidylcholine vesicles by time-dependent fluorescence shift and molecular dynamics simulations
European Journal of Pharmaceutics and Biopharmaceutics 2014, 87, 559-569. DOI: 10.1016/j.ejpb.2014.03.013
[44] A. Wizert, D. R. Iskander, L. Cwiklik, Organization of Lipids in the Tear Film: A Molecular-Level View
PLOS ONE 2014, 9, e92461. DOI: 10.1371/journal.pone.0092461
[43] M. Pederzoli, L. Sobek, J. Brabec, K. Kowalski, L. Cwiklik, J. Pittner, Fluorescence of PRODAN in Water: a Computational QM/MM MD Study
Chemical Physics Letters 2014, 597, 57-62. DOI: 10.1016/j.cplett.2014.02.031
[42] M. Stefl, R. Sachl, A. Olzynska, M. Amaro, D. Savchenko, A. Deyneka, A. Hermetter, L. Cwiklik, J. Humpolickova, M. Hof, Comprehensive Portrait of Cholesterol Containing Oxidized Membrane
BBA Biomembranes 2014, 1838, 1769–1776. DOI: 10.1016/j.bbamem.2014.02.006
[41] S. Timr, A. Bondar, L. Cwiklik, M. Stefl, M. Hof, M. Vazdar, J. Lazar, P. Jungwirth, Accurate determination of the orientational distribution of a fluorescent molecule in a phospholipid membrane
Journal of Physical Chemistry B 2014, 118, 855-863. DOI: 10.1021/jp4067026
2013
[40] M. Vazdar, E. Wernersson, M. Khabiri, L. Cwiklik, P. Jurkiewicz, M. Hof, E. Mann, S. Kolusheva, R. Jelinek, P. Jungwirth, Aggregation of Oligoarginines at Phospholipid Membranes: Molecular Dynamics Simulations, Time-Dependent Fluorescence Shift, and Biomimetic Colorimetric Assays
Journal of Physical Chemistry B 2013, 117, 11530-11540. DOI: 10.1021/jp405451e
[39] S. Pokorna, P. Jurkiewicz, L. Cwiklik, M. Vazdar, M. Hof, Interactions of monovalent salts with cationic lipid bilayers
Faraday Discussions 2013, 160, 341-358. DOI: 10.1039/C2FD20098H
2012
[38] N. Uras-Aytemiz, L. Cwiklik, J.P. Devlin, Tracking all-vapor instant gas-hydrate formation and guest molecule populations: A possible probe for molecules trapped in water nanodroplets
Journal of Chemical Physics 2012, 137, 204501. DOI: 10.1063/1.4767370
[37] M. Lis, L. Pintal, J. Swiatek, L. Cwiklik, GPU-Based Massive Parallel Kawasaki Kinetics in the Dynamic Monte Carlo Simulations of Lipid Nanodomains
Journal of Chemical Theory and Computation 2012, 8, 4758-4765. DOI: 10.1021/ct300587w
[36] L. Beranova, J. Humpolickova, J. Sykora, A. Benda, L. Cwiklik, P. Jurkiewicz, G. Grobner, M. Hof, Effect of heavy water on phospholipid membranes: experimental confirmation of molecular dynamics simulations
Physical Chemistry Chemical Physics 2012, 14, 14516-14522. DOI: 10.1039/C2CP41275F
[35] P. Jurkiewicz, A. Olzynska, L. Cwiklik, E. Conte, P. Jungwirth, F.M. Megli, M. Hof, Biophysics of lipid bilayers containing oxidatively modified phospholipids: Insights from fluorescence and EPR experiments and from MD simulations (Review Paper)
BBA Biomembranes 2012, 1818, 2388–2402. DOI: 10.1016/j.bbamem.2012.05.020
[34] M. Vazdar, P. Jurkiewicz, M. Hof, P. Jungwirth, L. Cwiklik, Behavior of 4-hydroxynonenal in phospholipid membranes
Journal of Physical Chemistry B 2012, 116, 6411-6415. DOI: 10.1021/jp3044219
[33] P. Jurkiewicz, L. Cwiklik, A. Vojtiskova, P. Jungwirth, M. Hof, Structure, Dynamics, and Hydration of POPC/POPS Bilayers Suspended in NaCl, KCl, and CsCl
BBA Biomembranes 2012, 1818, 609-616. DOI: 10.1016/j.bbamem.2011.11.033
[32] M. Khabiri, M. Roeselova, L. Cwiklik, Properties of Oxidized Phospholipid Monolayers: an Atomistic Molecular Dynamics Study
Chemical Physics Letters 2012, 519-520, 93-99. DOI: 10.1016/j.cplett.2011.11.016
[31] P. Jurkiewicz, L. Cwiklik, P. Jungwirth, M. Hof, Lipid hydration and mobility: An interplay between fluorescence solvent relaxation experiments and molecular dynamics simulations (Minireview Paper)
Biochimie 2012, 94, 26-32. DOI: 10.1016/j.biochi.2011.06.027
2011
[30] M. Lis, A. Wizert, M. Przybylo, M. Langner, J. Swiatek, P. Jungwirth, L. Cwiklik, The Effect of Lipid Oxidation on the Water Permeabilityof Phospholipid Bilayers
Physical Chemistry Chemical Physics 2011, 13, 17555-17563. DOI: 10.1039/C1CP21009B
[29] L. Cwiklik, A.J.A. Aquino, M. Vazdar, P. Jurkiewicz, J. Pittner, M. Hof, H. Lischka, Absorption and Fluorescence of PRODAN in Phospholipid Bilayers: A Combined Quantum Mechanics and Classical Molecular Dynamics Study
Journal of Physical Chemistry A 2011, 115, 11428-11437. DOI: 10.1021/jp205966b
[28] M. Khabiri, A. Nikouee, L. Cwiklik, S. Grissmer, R. Ettrich, Charybdotoxin unbinding from the mKv1.3 potassium channel: A Combined computational and experimental study
Journal of Physical Chemistry B 2011, 115, 11490-11500. DOI: 10.1021/jp2061909
[27] R. Volinsky, L. Cwiklik, P. Jurkiewicz, M. Hof, P. Jungwirth, P. Kinnunen, Oxidized Phosphatidylcholines Facilitate Phospholipid Flip-flop in Liposomes
Biophysical Journal 2011, 101, 1376-1384. DOI: 10.1016/j.bpj.2011.07.051
[26] B. Jagoda-Cwiklik, L. Cwiklik, P. Jungwirth, Behavior of the Eigen form of hydronium at the air/water interface
Journal of Physical Chemistry A 2011, 115, 5881-5886. DOI: 10.1021/jp110078s
[25] W. Kulig, P. Kubisiak, L. Cwiklik, Steric and electronic effects in the host-guest hydrogen bonding in clathrate hydrates
Journal of Physical Chemistry A 2011, 115, 6149-6154. DOI: 10.1021/jp111245z
[24] M. Petrov, L. Cwiklik, P. Jungwirth, Interactions of molecular ions with model phospholipid membranes
Collection of Czechoslovak Chemical Communications 2011, 76, 695-711. DOI: 10.1135/cccc2011026
[23] N. Ottosson, L. Cwiklik, J. Soderstrom, O. Bjorneholm, G. Ohrwall, P. Jungwirth, Increased propensity of I(aq)- for the water surface in non-neutral solutions: Implications for the interfacial behavior of H3O(aq)+ and OH(aq)-
Journal of Physical Chemistry Letters 2011, 2, 972-976. DOI: 10.1021/jz2003233
2010
[22] L. Cwiklik, J. P. Devlin, Hindering of rotational motion of guest molecules in the Type I clathrate hydrate
Chemical Physics Letters 2010, 494, 206-212. DOI: 10.1016/j.cplett.2010.06.025
[21] L. Beranova, L. Cwiklik, P. Jurkiewicz, M. Hof, P. Jungwirth, Oxidation Changes Physical Properties of Phospholipid Bilayers: Flueorescence Spectroscopy and Molecular Simulations
Langmuir 2010, 26, 6140-6144. DOI: 10.1021/la100657a
[20] I.A. Monreal, L. Cwiklik, B. Jagoda-Cwiklik, J.P. Devlin, Classical to nonclassical transition of Ether-HCN clathrate hydrates at low temperature
Journal of Physical Chemistry Letters 2010, 1, 290-294. DOI: 10.1021/jz900073n
[19] L. Cwiklik, P. Jungwirth, Massive oxidation of phospholipid membranes leads to pore creation and bilayer disintegration (Editor’s Choice paper)
Chemical Physics Letters 2010, 486, 99-103. DOI: 10.1016/j.cplett.2010.01.010
2009
[18] V. Buch, J. P. Devlin, I. A. Monreal, B. Jagoda-Cwiklik, N. Aytemiz-Uras, L. Cwiklik, Clathrate-Hydrates with Hydrogen-Bonding Guests (Perspective Paper)
Physical Chemistry Chemical Physics 2009, 11, 10245-10265. DOI: 10.1039/b911600c
[17] L. Cwiklik, J.P. Devlin, V. Buch, Hydroxide impurity in ice
Journal of Physical Chemistry A 2009, 113, 7482-7490. DOI: 10.1021/jp900545d
[16] L. Cwiklik, V. Buch, Hydroxide trapped in the interior of ice – a computational study (Hot Paper)
Physical Chemistry Chemical Physics 2009, 11, 1294-1296. DOI: 10.1039/b820031a
2008
[15] L. Cwiklik, P. Kubisiak, W. Kulig, P. Jungwirth, Reactivity of a sodium atom in vibrationally excited water clusters: An ab initio molecular dynamics study
Chemical Physics Letters 2008, 460, 112-115. DOI: 10.1016/j.cplett.2008.05.075
[14] L. Cwiklik, U. Buck, W. Kulig, P. Kubisiak, P. Jungwirth, A Sodium Atom in a Large Water Cluster: Electron Delocalization and Infrared Spectra
Journal of Chemical Physics 2008, 128, 154306. DOI: 10.1063/1.2902970
[13] R. Vacha, L. Cwiklik, J. Rezac, P. Hobza, P. Jungwirth, K. Valsaraj, S. Bahr, V. Kempter, Adsorption and Heterogeneous Reactions of Aromatic Hydrocarbons at Environmental Aqueous Surfaces
Journal of Physical Chemistry A 2008, 112, 4942. DOI: 10.1021/jp711813p
[12] B. Jagoda-Cwiklik, P. Slavicek, L. Cwiklik, D. Nolting, B. Winter, P. Jungwirth, Ionization of imidazole in the gas phase, microhydrated environments, and in the aqueous solution
Journal of Physical Chemistry A 2008, 112, 3499. DOI: 10.1021/jp711476g
[11] E.F. Aziz, S. Eisebitt, W. Eberhard, L. Cwiklik, P. Jungwirth, Existence of extended oriented ion-hydroxide clusters in concentrated aqueous solution
Journal of Physical Chemistry B 2008, 112, 1262-1266. DOI: 10.1021/jp075031w
2007
[10] L. Cwiklik, Influence of surface diffusion on catalytic reactivity of spatially inhomogeneous surfaces – mean field modeling
Chemical Physics Letters 2007, 449, 304-308. DOI: 10.1016/j.cplett.2007.10.096
[9] B. Jagoda-Cwiklik, L. Cwiklik, Coarse grain simulations of the influence of adsorbate-adsorbate interactions on adsorption and diffusion of n-butane in silicalite-1
Chemical Physics Letters 2007, 445, 42-46. DOI: 10.1016/j.cplett.2007.07.069
[8] L. Rulisek, O. Exner, L. Cwiklik, P. Jungwirth, I. Stary, L. Pospisil, Z. Havlas, On the Convergence of the Physico-Chemical Properties of [n]Helicenes
Journal of Physical Chemistry C 2007, 111, 14948-14955. DOI: 10.1021/jp075129a
[7] L. Cwiklik, G. Andersson, L.X. Dang, P. Jungwirth, Segregation of inorganic ions at surfaces of polar non-aqueous liquids (Minireview Paper)
ChemPhysChem 2007, 8, 1457-1463. DOI: 10.1002/cphc.200700039
[6] G. Andersson, H. Morgner, L. Cwiklik, P. Jungwirth, Anions of Alkali Halide Salts at Surfaces of Formamide Solutions: Concentration Depth Profiles and Surface Topography
Journal of Physical Chemistry C 2007, 111, 4379-4387. DOI: 10.1021/jp067726n
2006
[5] B. Winter, M. Faubel, I.V. Hertel, S.E. Bradforth, B. Jagoda-Cwiklik, L. Cwiklik, P. Jungwirth, Electron binding energies of hydrated H3O+ and OH-: Photoelectron spectroscopy of aqueous acid and base solutions combined with electronic calculations
Journal of the American Chemical Society 2006, 128, 3864-3865. DOI: 10.1021/ja0579154
2005
[4] L. Cwiklik, B. Jagoda-Cwiklik, M. Frankowicz, Influence of the spacing between metal particles on the kinetics of reaction with spillover on the supported metal catalyst
Applied Surface Science 2005, 252, 778-783. DOI: 10.1016/j.apsusc.2005.02.107
[3] B. Jagoda-Cwiklik, L. Cwiklik, M. Frankowicz, Theoretical study of the influence of confinement and channel blocking on adsorption and diffusion of n-butane in silicalite-1
Applied Surface Science 2005, 252, 699-706. DOI: 10.1016/j.apsusc.2005.02.051
2004
[2] L. Cwiklik, B. Jagoda-Cwiklik M. Frankowicz, Influence of spatial distribution of active centers on the kinetics of model heterogeneous catalytic processes
Surface Science 2004, 572, 318-328. DOI: 10.1016/j.susc.2004.09.008
2003
[1] B. Jagoda-Cwiklik, L. Cwiklik, M. Frankowicz, Simulations of temperature programmed desorption spectra from porous surfaces
Applied Surface Science 2003, 219, 276-281. DOI: 10.1016/S0169-4332(03)00699-8
Conference presentations
[57] L. Cwiklik, "Tear Film Lipid Layer - a Molecular-Level View" (invited oral presentation), Structural Transitions of Biomolecules in Theory and Experiment, Feb 23-25, 2017, Hunfeld, Germany
[56] L. Cwiklik, "A complex nature of calcium cations interactions with cell membranes" (invited keynote oral presentation), Sept 4-8, 2016, Current Trends in Theoretical Chemistry VII, Krakow, Poland
[55] A. Olzynska, A. Wizert, D.R. Iskander, L. Cwiklik, "Lysozyme in the tear film lipid layer" (poster), Feb 27-March 2, 2016, 60th Biophysical Society Annual Meeting, Los Angeles, CA, USA
[54] L. Cwiklik, "Molecular-Level Organization of the Tear Film Lipid Layer" (invited oral presentation), 3rd European Joint Theoretical/Experimental Meeting on Membranes, Sept 30 - Oct 2, 2015, Stockholm, Sweden
[53] L. Cwiklik, "Interactions of calcium cations with phospholipid membranes" (invited oral presentation), "LEVI 2" Workshop on Membrane-Protein Interactions, May 14-17, 2015, Nove Hrady, Czech Republic
[52] L. Cwiklik, M. Olsinova, "LAT Peptide in Model Membranes" (invited oral presentation), Prague Membrane Discussions, March 26, 2015, Prague, Czech Republic
[51] A. Wizert, R. Iskander, L. Cwiklik, "Interactions of Lysozyme with the Tear Film Lipid Layer: A Molecular Dynamics Simulation Study" (poster), February 7-11, 2015, 59th Biophysical Society Annual Meeting, Baltimore, MD, USA
[50] L. Cwiklik, "Interactions of calcium cations with phospholipid membranes" (invited oral presentation), October 1-3, 2014, 2nd European Joint Theoretical/Experimental Meeting on Membranes, Olomouc, Czech Republic
[49] A. Wizert, D.R. Iskander, P. Jungwirth, L. Cwiklik, “Molecular-Level Organization of the Tear Film Lipid Layer: A Molecular Dynamics Simulations Study” (poster), February 15-19, 2014, 58th Biophysical Society Annual Meeting, San Francisco, CA, USA
[48] A. Wizert, D.R. Iskander, L. Cwiklik, “Molecular-Level Organization of Lipids in the Tear Film: A Molecular Dynamics Simulations Study” (poster), 21-24 September, 2013, Amsterdam, Netherlands
[47] L. Cwiklik, “Molecular-level modeling of lipid membranes: cell membrane under oxidative stress and tear film during eye blinking” (invited oral presentation), Current Trends in Theoretical Chemistry VI, September 1-5, 2013, Krakow, Poland
[46] L. Cwiklik, P. Jurkiewicz, M. Vazdar, P. Jungwirth, M. Hof, Short-chain products of lipid oxidation in phospholipid membranes” (invited oral presentation), 6th Wroclaw-Prague Seminar on Biophysics of Lipids, October 7-10, 2012, Wroclaw, Poland
[45] S. Pokorna, P. Jurkiewicz, L. Cwiklik, M. Hof, “Interactions of monovalent salts with cationic lipid bilayers” (invited oral presentation, presented by P. Jurkiewicz), Faraday Discussion 160: Ion Specific Hofmeister Effects, September 3-5, 2012, Queens College Oxford, UK
[44] L. Cwiklik, P. Jurkiewicz, S. Pokorna, A. Vojtiskova, M. Vazdar, M. Hof, P. Jungwirth, “Ionic Effects in Cationic and Anionic Lipid Membranes” (poster), Gordon Research Conference on Water & Aqueous Solutions, Holderness NH, USA, August 12-17, 2012
[43] M. Khabiri, L. Cwiklik, “Structural properties of oxidized lipid monolayers based on atomistic simulations” (invited lecture), American Chemical Society Meeting, Denver, CO, USA, August 28th – September 1st, 2011
[42] L. Cwiklik, M. Vazdar, P. Jurkiewicz, “Interactions of Monovalent Ions With Charged Phospholipid Membranes” (oral presentation), Molecular Engineering Summer School, Uto Island, Finland, June 4-11, 2011
[41] L. Cwiklik, L. Sobek, M. Vazdar, P. Jurkiewicz, A.J.A. Aquino, H. Lischka, J. Pittner, “Absorption and Fluorescence Spectra of PRODAN in phospholipid membranes: A Mixed TDDFT/MD Study” (poster), 4th JCS Symposium for Theoretical and Computational Chemistry, Liblice, Czech Republic, May 18-20, 2011
[40] R. Pleskot, P. Brettlova, L. Cwiklik, M. Potocky, P. Jungwirth, V. Zarsky, “The role of exocyst Sec3 subunit as a landmark protein” (poster, presented by R. Pleskot), Annual Symposium of the Biochemical Society, Cambridge, UK, January 5-7, 2011
[39] L. Cwiklik, “Influence of membrane oxidation on phospholipid flip-flop” (oral presentation), 5th Prague-Wroclaw Seminar on Biophysics of Lipids, Prague, Czech Republic, November 16-19, 2010
[38] L. Cwiklik, P. Jungwirth, “Oxidation changes hydration and other biophysical properties of phospholipid membranes” (poster), Gordon Research Conference on Water & Aqueous Solutions, Holderness NH, USA, August 8th-13th, 2010
[37] L. Cwiklik, “Interfacial properties of oxidized phospholipid bilayers” (oral presentation), US-Poland Workshop and Summer School: Nanoscale Phenomena in Materials and at Interfaces, Cracow, Poland, June 6th-10th, 2010
[36] L. Cwiklik, “Oxidized phospholipid membranes” (oral presentation), Mini-symposium on computation of interactions in biological systems, Nove Hrady, Czech Republic, December 12th-13th, 2009
[35] L. Cwiklik, “Hydroxide in ice” (oral presentation), Symposium on Interfaces, The Fritz Haber Center for Molecular Dynamics, Jerusalem, Israel, May 25th-26th, 2009
[34] L. Cwiklik, V. Buch, “Hydroxide Ion in the Interior of Ice” (poster), Gordon Research Conference on Water & Aqueous Solutions, Holderness NH, USA, July 27th – August 1st, 2008
[33] L. Cwiklik, “A sodium atom in water clusters – an ab initio molecular dynamics study” (oral presentation), Current Trends in Theoretical Chemistry V, Krakow, Poland, July 6th – 10th, 2008
[32] L. Cwiklik, P. Jungwirth, “Ionization potential of sodium and imidazole in small water clusters – ab-initio molecular dynamics study” (poster), S3C Symposium on Size Selecter Clusters 2007, Brand, Austria, March 12th – 15th, 2007
[31] L. Cwiklik, P. Jungwirth, “Surfaces of non-aqueous solutions of sodium iodide” (poster), UK-V4 Frontiers of Science Symposium, Krakow, Poland, February 21st – 23rd, 2007
[30] L. Cwiklik, P. Jungwirth, “Surfaces of non-aqueous solutions of sodium iodide” (poster), 6th European Conference on Computational Chemistry, Tale, Slovakia, September 3rd – 7th, 2006
[29] M. Frankowicz, L. Cwiklik, B. Jagoda-Cwiklik, M. Chrenowski, “Mesoscopic simulations of physicochemical processes on heterogeneous surfaces” (oral presentation), IMACS 2005 World Congress – Scientific Computation, Applied Mathematics and Simulation, Paris, France, July 11th – 15th, 2005
[28] L. Cwiklik, B. Jagoda-Cwiklik, M. Frankowicz, “Distribution Geometry of Active Centers and Efficiency of Heterogeneous Reactions” (poster), 37th Polish Conference on Catalysis, Krakow, Poland, March 15th – 18th, 2005
[27] B. Jagoda-Cwiklik, L. Cwiklik, M. Frankowicz, “Simulations of adsorption and diffusion in microporous materials using Dynamic Monte Carlo methods” (poster in Polish), 37th Polish Conference on Catalysis, Krakow, Poland, March 15th – 18th, 2005
[26] L. Cwiklik, B. Jagoda-CwiklikM. Frankowicz, “Geometric heterogeneities and the kinetics of catalytic reactions with spillover on supported metal catalysts” (poster), Surface Heterogeneity Effects in Adsorption and Catalysis on Solids ISSHAC-5, Gdansk, Poland, August 30th – September 3rd, 2004
[25] B. Jagoda-Cwiklik, L. Cwiklik, M. Frankowicz, “Monte Carlo simulations of chemical reactions in microporous systems” (poster), Surface Heterogeneity Effects in Adsorption and Catalysis on Solids ISSHAC-5, Gdansk, Poland, August 30th – September 3rd, 2004
[24] L. Cwiklik, B. Jagoda-CwiklikM. Frankowicz, “Influence of spatial distribution of active centers on the kinetics of model heterogeneous catalytic processes” (poster in Polish), XLVII Polish Chemical Society Meeting, Wroclaw, Poland, September 12th – 17th, 2004
[23] L. Cwiklik, B. Jagoda-Cwiklik, M. Frankowicz, “Modelling of surface reactions with spillover effects using Monte Carlo method” (poster in Polish), 36th National Conference on Catalysis, Krakow, Poland, March 17-19, 2004
[22] S. Witkowski, L. Cwiklik, K. Podolska, Z. Sojka, “The mechanism of bonding of chrome(III) complexes with the surface of montmorillonite intercaleted with Al13 complexes” (poster in Polish), 36th National Conference on Catalysis, Krakow, Poland, March 17-19, 2004
[21] M. Frankowcz, L. Cwiklik, B. Jagoda-Cwiklik, “Mesoscopic simulation of heterogeneities on reactive surfaces” (oral presentation), XIII Krakow-Jena Seminar on Physical Chemistry, Krakow, Poland, September 30th – October 4th, 2003
[20] L. Cwiklik, B. Jagoda-Cwiklik, M. Frankowicz, “Modeling of chemical reactions on inhomogeneous surfaces” (oral presentation in Polish), XLVI Polish Chemical Society Meeting, Lublin, Poland, September 15-18, 2003
[19] B. Jagoda-Cwiklik, L. Cwiklik, M. Frankowicz, “Simulations of chemical reactions in porous systems” (poster in Polish), XLVI PTCHem and SITPChem Meeting, Lublin, Poland, September 15-18, 2003
[18] L. Cwiklik, B. Jagoda-Cwiklik, M. Frankowicz, “Modeling of deer migration based on the concept of active Brownian particles” (poster), International Workshop on Complex Systems in Natural and Social Sciences (CSNSS’2002), Matrafured, Hungary, October 20-24, 2002
[17] L. Cwiklik, B. Jagoda-Cwiklik, M. Frankowicz, “Distribution geometry of active centers and efficiency of heterogeneous reaction – stochastic simulations” (oral presentation), 3nd European Interdisciplinary School on Nonlinear Dynamics EUROATTRACTOR, Warsaw, Poland, June 18-27, 2002
[16] L. Cwiklik, A. Gora, M. Frankowicz, “Mesoscopic modeling of reactions on V-W-O catalyst surface”, (poster), Current Trends in Theoretical Chemistry IV – Fifty Years of Theoretical Chemistry in Poland (CTTC-IV), Krakow, Poland, June 13-15, 2002
[15] L. Cwiklik, B. Jagoda, M. Frankowicz, “Mesoscopic description of heterogeneous reaction kinetics” (poster), Current Trends in Theoretical Chemistry IV – Fifty Years of Theoretical Chemistry in Poland (CTTC-IV), Krakow, Poland, June 13-15, 2002
[14] L. Cwiklik, B. Jagoda, M. Frankowicz, “Mesoscopic modeling of surface processes – thermodesorption from porous materials and reactions on surfaces with various active sites geometries” (poster), Stochastic Processes Applied to Complex Systems: Computational Endeavors vs. Conceptual Frontiers, Bydgoszcz, Poland, May 21-23, 2002
[13] L. Cwiklik, B. Jagoda, M. Frankowicz, “Temperature Programmed Desorption from porous surface – a stochastic model” (poster), 34th National Conference on Catalysis, Krakow, Poland, March 20-22, 2002
[12] L. Cwiklik, B. Jagoda, M. Frankowicz, “Influence of temperature on morphology of Ag(001) surface sputtered with Ar+ ions – molecular dynamics and Monte Carlo simulations” (poster), 34th National Conference on Catalysis, Krakow, Poland, March 20-22, 2002
[11] L. Cwiklik, B. Jagoda, P. Bialic, M. Frankowicz, “Mesoscopic modeling of influence of catalyst surface structure on dynamics of heterogeneous reaction” (oral presentation), Information Systems in Chemistry (SIC’2001), Iwonicz-Zdroj, Poland, October 25-27, 2001
[10] L. Cwiklik, B. Jagoda, P. Bialic, M. Frankowicz, “Stochastic simulations of ecological system: how to feed deer in an optimal way” (poster), International Workshop on Complex Systems in Natural and Social Sciences (SCNSS’2001), Torun, Poland, October 18-21, 2001
[9] L. Cwiklik, B. Jagoda, P. Bialic, M. Frankowicz, “Mesoscopic model of TPD spectra from porous surfaces” (poster), 14th Marian Smoluchowski Symposium on Statistical Physics, Zakopane, Poland, September 9-14, 2001
[8] L. Cwiklik, B. Jagoda, P. Bialic, M. Frankowicz, “Stochastic simulations of TPD spectra” (poster), European Science Foundation REACTOR Workshop, Leeds, England, September 7-10, 2001
[7] A. Gora, L. Cwiklik, E. Broclawik, M. Frankowicz, “DFT and Cellular Automata Modeling of the V-W-O Catalyst Surface – Water Behavior” (poster), EUROPACAT V, Limerick, Ireland, September 2-7, 2001
[6] P. Bialic, L. Cwiklik, B. Jagoda, “Micro- and mesoscopic modeling of surface structure and dynamics” (oral presentation), 2nd European Interdisciplinary School on Nonlinear Dynamics EUROATTRACTOR, Warsaw, Poland, June 19-28, 2001
[5] L. Cwiklik, M. Frakowicz, A. Gora, “From micro- to meso-level calculations: DFT and Cellular Automata Modeling of V-W-O Catalyst Surface” (poster), 17th North America Catalysis Society Meeting, Toronto, Canada, June 3-8, 2001
[4] A. Gora, L. Cwiklik, M. Frankowicz, “Modelling of water dissociation dynamics on V-W-O surface – DFT and cellular automata” (poster), 33th National Conference on Catalysis, Krakow, Poland, March, 2001
[3] P. Bialic, L. Cwiklik, B. Jagoda, M. Frankowicz, “Mesoscopic simulations of heterogeneous catalytic systems” (poster), European Science Foundation REACTOR Workshop, Palermo, Sicily, January 18-20, 2001
[2] L. Cwiklik, B. Jagoda, P. Bialic, M. Frankowicz, “Modelling of surface reactions on micro- and mesoscopic level” (poster), International Workshop on Complex Systems in Natural and Social Sciences (SCNSS’2000), Zakopane, Poland, October 5-8, 2000
[1] B. Jagoda, L. Cwiklik, P. Bialic, “Cellular automata modelling of surface reactions” (poster), 13th Marian Smoluchowski Symposium on Statistical Physics, Zakopane, Poland, September 6-12, 2000
Other publications
[3] L. Cwiklik et al., Spillover on supported catalysts – Dynamic Monte Carlo study, arxiv.org/physics/0409153
[2] L. Cwiklik, B. Jagoda-Cwiklik M. Frankowicz, Distribution Geometry of Active Centers and Efficiency of Heterogeneous Reaction, in: Ed. W. Klonowski, Simplicity behind Complexity (ISBN 1-59326-065-2, PABST Science Publishers, 2004)
[1] P. Bialic, L. Cwiklik, B. Jagoda, “Application of Cellular Automata Techniques to Modeling of Surface Phenomena in Chemical Systems”, in: Ed. W. Klonowski, From Quanta to Societies (ISBN 1-59326-000-8, PABST Science Publishers, 2002)